CDS

Accession Number TCMCG016C10727
gbkey CDS
Protein Id OMO83274.1
Location complement(join(52496..52573,53312..53377,53739..53917,54142..54370,54693..54917,55307..55649,56232..56647))
Organism Corchorus capsularis
locus_tag CCACVL1_11469

Protein

Length 511aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009894.1
Definition hypothetical protein CCACVL1_11469 [Corchorus capsularis]
Locus_tag CCACVL1_11469

EGGNOG-MAPPER Annotation

COG_category A
Description U3 small nucleolar RNA-interacting protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14793        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000151        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005732        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008037        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009875        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031428        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048544        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060321        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080008        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGAACAAGAATGAGAAGAAGAGAGGGCCGGCCCCAAAAGGAGGGCAAAAGGGCAAGAAGTTTTCCATGAACAATGACCCATTCTTCGATATGAAGACCAAGAAGCGGCGGAAAACGGAGTATGAGGACGATGACATTGAGTCAGGGGACTCTGAAGAGGAGGCAGGGATTCTCGGGGGTTCTGATGCAAGTGAGGGCGAGGAGTTTGAGGAGGAGACTCCCGGTGAGGTTCGGAAAAGAATGGCGACGGATTTTTTGGATAAAATGAGAGCAATAGCAAGAAAGGAGAAAGTAGAAGATGAGGATGAGGATAGCGAGGAAGGGGAAGAGGTCAGAGATTCGCTTGTGGCTAAGATTTTGCAGCAGGAGCAGCTTGAGGAGAGTGGTCGGATTAGGAGAGTCCTTGCTTCCAGGCTTAAAAAACCAGAAACTGTTGATGGATTTGAGGCCTTAGTGAAGCACAGGCAATCTGTTACTGCTGTTGCTCTCTCTGATGATGACTTGAAGGGCTTTTCAGCATCCAAAGATGGTACTATCTTACAATGGGAAGCAGAAAGTGGCAAAACTGAAAAGTACCAATGGCCTAGTGATGATATTCTTAAGAGTCACGGGGCCAAGGATCCACGAGGCCTAAATAAAAAACATAGTAGAAGTGTTTTAGCATTGGCTGTTAGTTCTGATGGGCGGTATTTGGCAAGTGGAGGCTTGGACCGCCATGTTCATCTGTGGGACACTCGTACAAGACAGCATTTGCAGGCATTTTCAGGTCATCAAAAACCTGTTTCGTGTTTAAGTTTTCGGGAAGGCACCACAGAGCTTTTTTCTGGATCATTTGATCGAACTGTCAAGCATTGGAATATGGAAGATAGAGCTTATATTGACACGATATGTGGTCATGAAAGTGAAGTATTGACCCTTGATTGCCTAAGGAAAGAACGAGTATTGACCGTTGGACGTGATCGGTCTATGATGATGTTTAAGGTCCTTGACCAGTCACGTTTGGTATTTCGTCCTCCACCATCATCTTTGGAATGCTGTTGTTTTGTTAACCATGATGAATTCTTATCCGGCTCGGACGATGGAAGTATTCAACTTTGGAGCGCAACAAGAAAGAAACCTGTATATATTGTGAAGAATGCCCATGCTCTGCTGCCTGCTGGTCAGAATGTTGAACAAAAAGGCAGTGAAAAGATCCCCACTAGCGTTTCAGTGAATGGTGATCATGAAATTCGGAGCTATAATTGCTCATCTACATATTCCTGGGTCAGTTCAGTCACTGTATGTAGAGGCAGTGACCTTGCTGCATCAGGAGCTGGTAATGGTTGTGTTCGATTATGGGCCATTGAGAGTGGGAGAAAGGACATTCAACCCTTGTATGACGTTCCACTGGTTGGATTTGTTAATTCCCTGGCTTTTGCAAATTCTGGACGGTTTCTAATTGCTGGAGTTGGACAGGAACCCCGACTGGGAAGATGGGGACGCCATCCGGCAGCTCGGAATGGAGTTGCAATGCTGCCCTTGAACATCATCTAA
Protein:  
MKNKNEKKRGPAPKGGQKGKKFSMNNDPFFDMKTKKRRKTEYEDDDIESGDSEEEAGILGGSDASEGEEFEEETPGEVRKRMATDFLDKMRAIARKEKVEDEDEDSEEGEEVRDSLVAKILQQEQLEESGRIRRVLASRLKKPETVDGFEALVKHRQSVTAVALSDDDLKGFSASKDGTILQWEAESGKTEKYQWPSDDILKSHGAKDPRGLNKKHSRSVLALAVSSDGRYLASGGLDRHVHLWDTRTRQHLQAFSGHQKPVSCLSFREGTTELFSGSFDRTVKHWNMEDRAYIDTICGHESEVLTLDCLRKERVLTVGRDRSMMMFKVLDQSRLVFRPPPSSLECCCFVNHDEFLSGSDDGSIQLWSATRKKPVYIVKNAHALLPAGQNVEQKGSEKIPTSVSVNGDHEIRSYNCSSTYSWVSSVTVCRGSDLAASGAGNGCVRLWAIESGRKDIQPLYDVPLVGFVNSLAFANSGRFLIAGVGQEPRLGRWGRHPAARNGVAMLPLNII